Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AL080243.2-201ENST00000418783 582 ntBASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AC093909.1-201ENST00000504731 1122 ntBASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AL662844.1-201ENST00000546340 181 ntBASIC10.4□□□□□ -0.74
LINC01546A6NGU7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AC145285.3-201ENST00000564603 959 ntBASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 AC138761.1-201ENST00000584393 385 ntBASIC10.4□□□□□ -0.74
LINC01546A6NGU7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC01546A6NGU7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 AP003969.2-201ENST00000623739 2275 ntBASIC10.4□□□□□ -0.75
LINC01546A6NGU7 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 AC002350.2-201ENST00000623894 1828 ntBASIC10.4□□□□□ -0.75
LINC01546A6NGU7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC01546A6NGU7 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AL590440.2-201ENST00000641973 1595 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 C2-209ENST00000452323 1999 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AC004623.1-201ENST00000624592 2127 ntBASIC10.39□□□□□ -0.75
LINC01546A6NGU7 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC01546A6NGU7 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms