Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AC131206.1-201ENST00000538078 1211 ntBASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AL096828.3-201ENST00000615354 462 ntBASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 AP001267.2-201ENST00000532619 2086 ntBASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
COL4A3BPQ9Y5P4 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 HSPB1P2-201ENST00000448722 546 ntBASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 MIR4683-201ENST00000579659 81 ntBASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AC104982.3-201ENST00000581995 514 ntBASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AC243960.2-201ENST00000600996 747 ntBASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 AL118558.3-201ENST00000607414 1079 ntBASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 GPR182-203ENST00000622922 591 ntBASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COL4A3BPQ9Y5P4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AC020907.1-201ENST00000616460 1350 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 AC020910.5-201ENST00000623668 1865 ntBASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COL4A3BPQ9Y5P4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms