Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF7Q9UBF6 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF7Q9UBF6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AC079178.1-201ENST00000420915 656 ntBASIC12.49□□□□□ -0.41
RNF7Q9UBF6 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 BNIP3P42-201ENST00000454982 569 ntBASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 BNIP3P29-201ENST00000598302 571 ntBASIC12.49□□□□□ -0.41
RNF7Q9UBF6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AC011447.5-201ENST00000616168 564 ntBASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AC244157.2-201ENST00000616239 1006 ntBASIC12.49□□□□□ -0.41
RNF7Q9UBF6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF7Q9UBF6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AC106881.1-201ENST00000605849 3329 ntBASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 HIST2H2BB-201ENST00000449108 381 ntBASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AL035414.1-201ENST00000451327 857 ntBASIC12.48□□□□□ -0.41
RNF7Q9UBF6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF7Q9UBF6 MIR4741-201ENST00000579822 90 ntBASIC12.48□□□□□ -0.41
RNF7Q9UBF6 EEF1DP1-201ENST00000585891 896 ntBASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AL358472.3-201ENST00000608147 415 ntBASIC12.48□□□□□ -0.41
RNF7Q9UBF6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms