Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 AC090643.2-201ENST00000623442 2029 ntBASIC14.02□□□□□ -0.16
VAPAQ9P0L0 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VAPAQ9P0L0 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 KRT8P35-201ENST00000483942 1338 ntBASIC14.02□□□□□ -0.17
VAPAQ9P0L0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 MEP1AP4-201ENST00000423244 1087 ntBASIC14.02□□□□□ -0.17
VAPAQ9P0L0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 AC111170.3-201ENST00000624282 2464 ntBASIC14.02□□□□□ -0.17
VAPAQ9P0L0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VAPAQ9P0L0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AL138725.1-201ENST00000407347 1314 ntBASIC14.01□□□□□ -0.17
VAPAQ9P0L0 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 GNAQP1-201ENST00000444815 1067 ntBASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AL359711.2-201ENST00000563105 872 ntBASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VAPAQ9P0L0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
VAPAQ9P0L0 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
VAPAQ9P0L0 LRRC59-203ENST00000576448 1531 ntBASIC14□□□□□ -0.17
VAPAQ9P0L0 AC015818.8-201ENST00000587907 1519 ntBASIC14□□□□□ -0.17
VAPAQ9P0L0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14□□□□□ -0.17
VAPAQ9P0L0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VAPAQ9P0L0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14□□□□□ -0.17
VAPAQ9P0L0 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14□□□□□ -0.17
VAPAQ9P0L0 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms