Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 AC015818.8-201ENST00000587907 1519 ntBASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRC4CQ9HCJ2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AL138799.1-201ENST00000448213 1675 ntBASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AC017083.2-201ENST00000608069 979 ntBASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 AC068760.1-201ENST00000493579 1953 ntBASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 KRT8P22-201ENST00000562317 1415 ntBASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRC4CQ9HCJ2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 AC026410.3-201ENST00000514280 936 ntBASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 AC011498.7-201ENST00000624986 2027 ntBASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRC4CQ9HCJ2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC4CQ9HCJ2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRC4CQ9HCJ2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRC4CQ9HCJ2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms