Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 MEX3B-202ENST00000558133 4333 ntBASIC18.25■□□□□ 0.51
UPF2Q9HAU5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 AL353779.1-201ENST00000434793 351 ntBASIC18.25■□□□□ 0.51
UPF2Q9HAU5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 SPDYE12P-201ENST00000618416 771 ntBASIC18.25■□□□□ 0.51
UPF2Q9HAU5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.25■□□□□ 0.51
UPF2Q9HAU5 RN7SL832P-201ENST00000607781 1756 ntBASIC18.25■□□□□ 0.51
UPF2Q9HAU5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 KRT8P14-201ENST00000414254 1442 ntBASIC18.24■□□□□ 0.51
UPF2Q9HAU5 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 CICP8-201ENST00000455800 2813 ntBASIC18.24■□□□□ 0.51
UPF2Q9HAU5 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
UPF2Q9HAU5 C8orf49-201ENST00000525043 1968 ntBASIC18.24■□□□□ 0.51
UPF2Q9HAU5 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.23■□□□□ 0.51
UPF2Q9HAU5 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.23■□□□□ 0.51
UPF2Q9HAU5 AL138828.2-201ENST00000615812 383 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms