Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 AL844908.2-201ENST00000609461 460 ntBASIC14.46□□□□□ -0.09
EBF4Q9BQW3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.46□□□□□ -0.09
EBF4Q9BQW3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
EBF4Q9BQW3 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
EBF4Q9BQW3 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 AC015688.4-201ENST00000580780 1647 ntBASIC14.45□□□□□ -0.1
EBF4Q9BQW3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 MIR6074-201ENST00000612054 107 ntBASIC14.45□□□□□ -0.1
EBF4Q9BQW3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
EBF4Q9BQW3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AC003102.2-201ENST00000589195 1469 ntBASIC14.44□□□□□ -0.1
EBF4Q9BQW3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AL139400.1-201ENST00000366220 510 ntBASIC14.44□□□□□ -0.1
EBF4Q9BQW3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms