Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.03■□□□□ -0
SEMA3CQ99985 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.03■□□□□ -0
SEMA3CQ99985 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.03■□□□□ -0
SEMA3CQ99985 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.03■□□□□ -0
SEMA3CQ99985 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SEMA3CQ99985 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 AC005912.2-201ENST00000619492 2400 ntBASIC15.03■□□□□ -0
SEMA3CQ99985 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SEMA3CQ99985 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.03■□□□□ -0
SEMA3CQ99985 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 AGGF1P1-201ENST00000509500 2073 ntBASIC15.02■□□□□ -0
SEMA3CQ99985 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3CQ99985 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SEMA3CQ99985 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 BCYRN1-201ENST00000418539 200 ntBASIC15.02■□□□□ -0
SEMA3CQ99985 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 YBX1P6-201ENST00000442962 1002 ntBASIC15.02■□□□□ -0
SEMA3CQ99985 PUDPP3-201ENST00000445368 636 ntBASIC15.02■□□□□ -0
SEMA3CQ99985 CHMP1AP1-201ENST00000445563 662 ntBASIC15.02■□□□□ -0
SEMA3CQ99985 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3CQ99985 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.02■□□□□ -0
SEMA3CQ99985 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.02■□□□□ -0
SEMA3CQ99985 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.02■□□□□ -0
SEMA3CQ99985 AC103810.3-201ENST00000583567 96 ntBASIC15.02■□□□□ -0
SEMA3CQ99985 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SEMA3CQ99985 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SEMA3CQ99985 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.02■□□□□ -0
SEMA3CQ99985 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 AC015688.4-201ENST00000580780 1647 ntBASIC15.02□□□□□ -0.01
SEMA3CQ99985 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SEMA3CQ99985 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEMA3CQ99985 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.01□□□□□ -0.01
SEMA3CQ99985 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEMA3CQ99985 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms