Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
NR1H4Q96RI1 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14□□□□□ -0.17
NR1H4Q96RI1 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14□□□□□ -0.17
NR1H4Q96RI1 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14□□□□□ -0.17
NR1H4Q96RI1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AC090114.2-201ENST00000608477 7054 ntBASIC13.99□□□□□ -0.17
NR1H4Q96RI1 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AL513480.1-201ENST00000451731 511 ntBASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AC018712.1-201ENST00000455767 687 ntBASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 ACTL9-202ENST00000612068 1252 ntBASIC13.99□□□□□ -0.17
NR1H4Q96RI1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AC117500.6-201ENST00000624871 588 ntBASIC13.99□□□□□ -0.17
NR1H4Q96RI1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 PCDHA5-203ENST00000614258 4248 ntBASIC13.99□□□□□ -0.17
NR1H4Q96RI1 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NR1H4Q96RI1 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AC079781.3-201ENST00000449110 356 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 OR7E47P-204ENST00000575924 449 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.98□□□□□ -0.17
NR1H4Q96RI1 FAM215A-202ENST00000632077 792 ntBASIC13.98□□□□□ -0.17
NR1H4Q96RI1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms