Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 CLK3P2-201ENST00000427566 1453 ntBASIC13.59□□□□□ -0.23
SNX18Q96RF0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SNX18Q96RF0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SNX18Q96RF0 CICP16-201ENST00000502609 2813 ntBASIC13.59□□□□□ -0.23
SNX18Q96RF0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.58□□□□□ -0.23
SNX18Q96RF0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SNX18Q96RF0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.58□□□□□ -0.23
SNX18Q96RF0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.58□□□□□ -0.23
SNX18Q96RF0 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.58□□□□□ -0.23
SNX18Q96RF0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 MEP1AP4-201ENST00000423244 1087 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 GAPDHP21-201ENST00000450301 1010 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 RN7SL692P-201ENST00000464677 288 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 FAM86LP-201ENST00000478302 853 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 AC135586.1-201ENST00000539323 574 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 AC093813.1-201ENST00000605066 256 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 AC025048.6-201ENST00000634326 1161 ntBASIC13.58□□□□□ -0.24
SNX18Q96RF0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.58□□□□□ -0.24
SNX18Q96RF0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SNX18Q96RF0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AL138799.1-201ENST00000448213 1675 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AC113367.3-201ENST00000508316 1912 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 HLA-K-203ENST00000430151 1046 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 SPDYE22P-201ENST00000582158 798 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AC004840.1-201ENST00000636359 365 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SNX18Q96RF0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AC015818.8-201ENST00000587907 1519 ntBASIC13.57□□□□□ -0.24
SNX18Q96RF0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.57□□□□□ -0.24
SNX18Q96RF0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms