Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH3Q96II8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH3Q96II8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH3Q96II8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH3Q96II8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH3Q96II8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
LRCH3Q96II8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 MIR1301-201ENST00000408518 82 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 AL929302.1-201ENST00000426556 871 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 KRT18P46-201ENST00000435568 1279 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 RN7SL582P-201ENST00000491078 279 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 GOLGA2P7-209ENST00000560408 745 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 DUX4L47-201ENST00000566374 394 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 CYP4F36P-201ENST00000589193 186 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 AC004466.2-201ENST00000614749 516 ntBASIC15.92■□□□□ 0.14
LRCH3Q96II8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.92■□□□□ 0.14
LRCH3Q96II8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRCH3Q96II8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC073347.1-201ENST00000421633 2643 ntBASIC15.91■□□□□ 0.14
LRCH3Q96II8 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC106827.1-201ENST00000366454 431 ntBASIC15.91■□□□□ 0.14
LRCH3Q96II8 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC108734.2-201ENST00000420887 1069 ntBASIC15.91■□□□□ 0.14
LRCH3Q96II8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 RHOQP2-201ENST00000449922 579 ntBASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC006529.1-201ENST00000459978 637 ntBASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.91■□□□□ 0.14
LRCH3Q96II8 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 MIR6746-201ENST00000620971 63 ntBASIC15.91■□□□□ 0.14
LRCH3Q96II8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRCH3Q96II8 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms