Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
HDAC11Q96DB2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AP000593.2-201ENST00000542775 1433 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AC097359.2-201ENST00000604992 2389 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 FKBP4P6-201ENST00000457486 1332 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AC063926.2-201ENST00000623766 1308 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 RNA5SP486-201ENST00000515961 83 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 CR383656.12-201ENST00000549567 513 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AC005225.4-201ENST00000557330 545 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AC106820.3-201ENST00000561653 397 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 ECM1P1-201ENST00000604092 1279 ntBASIC15.27■□□□□ 0.04
HDAC11Q96DB2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HDAC11Q96DB2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 AC005089.1-201ENST00000619486 2241 ntBASIC15.27■□□□□ 0.03
HDAC11Q96DB2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
HDAC11Q96DB2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 AL136172.1-201ENST00000598590 1394 ntBASIC15.26■□□□□ 0.03
HDAC11Q96DB2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 MRPL37P1-201ENST00000592451 1337 ntBASIC15.26■□□□□ 0.03
HDAC11Q96DB2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 AC016694.1-201ENST00000434179 700 ntBASIC15.26■□□□□ 0.03
HDAC11Q96DB2 KRT17P7-201ENST00000451704 1104 ntBASIC15.26■□□□□ 0.03
HDAC11Q96DB2 AL391280.1-201ENST00000506969 1062 ntBASIC15.26■□□□□ 0.03
HDAC11Q96DB2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.26■□□□□ 0.03
HDAC11Q96DB2 INE2-201ENST00000630399 1874 ntBASIC15.26■□□□□ 0.03
HDAC11Q96DB2 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms