Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AC073592.8-201ENST00000624126 511 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 CR383656.2-201ENST00000548656 2254 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.21□□□□□ -0.3
RFT1Q96AA3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
RFT1Q96AA3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.21□□□□□ -0.3
RFT1Q96AA3 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RFT1Q96AA3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RFT1Q96AA3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TUBB3P1-201ENST00000405796 1332 ntBASIC13.2□□□□□ -0.3
RFT1Q96AA3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 CNN2P2-201ENST00000443536 909 ntBASIC13.2□□□□□ -0.3
RFT1Q96AA3 CNN2P3-201ENST00000450201 906 ntBASIC13.2□□□□□ -0.3
RFT1Q96AA3 HLA-V-204ENST00000476601 1289 ntBASIC13.2□□□□□ -0.3
RFT1Q96AA3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AC004449.1-201ENST00000564240 433 ntBASIC13.2□□□□□ -0.3
RFT1Q96AA3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AL136317.3-201ENST00000618497 906 ntBASIC13.2□□□□□ -0.3
RFT1Q96AA3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RFT1Q96AA3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RFT1Q96AA3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RFT1Q96AA3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.19□□□□□ -0.3
RFT1Q96AA3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RFT1Q96AA3 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.19□□□□□ -0.3
RFT1Q96AA3 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.19□□□□□ -0.3
RFT1Q96AA3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms