Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13□□□□□ -0.33
TMEM54Q969K7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
TMEM54Q969K7 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13□□□□□ -0.33
TMEM54Q969K7 OR2I1P-210ENST00000642037 4691 ntBASIC13□□□□□ -0.33
TMEM54Q969K7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM54Q969K7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AL023775.1-201ENST00000454907 1746 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AC100850.1-201ENST00000506768 649 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AC027237.1-201ENST00000560942 655 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 DUX4L45-201ENST00000566406 1057 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 DUX4L46-201ENST00000566845 751 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AC133552.6-201ENST00000613406 534 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 COX11-210ENST00000639671 696 ntBASIC12.99□□□□□ -0.33
TMEM54Q969K7 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.99□□□□□ -0.33
TMEM54Q969K7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TMEM54Q969K7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.98□□□□□ -0.33
TMEM54Q969K7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AC011498.7-201ENST00000624986 2027 ntBASIC12.98□□□□□ -0.33
TMEM54Q969K7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AC027601.5-201ENST00000624065 2482 ntBASIC12.98□□□□□ -0.33
TMEM54Q969K7 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TMEM54Q969K7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.98□□□□□ -0.33
TMEM54Q969K7 AC132192.2-201ENST00000596206 1147 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms