Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ERCC4Q92889 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ERCC4Q92889 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.86■□□□□ 0.29
ERCC4Q92889 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.86■□□□□ 0.29
ERCC4Q92889 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.86■□□□□ 0.29
ERCC4Q92889 BRI3BPP1-201ENST00000594224 787 ntBASIC16.86■□□□□ 0.29
ERCC4Q92889 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 AC004466.1-201ENST00000599515 1080 ntBASIC16.86■□□□□ 0.29
ERCC4Q92889 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ERCC4Q92889 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ERCC4Q92889 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
ERCC4Q92889 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
ERCC4Q92889 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
ERCC4Q92889 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ERCC4Q92889 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC4Q92889 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC4Q92889 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC4Q92889 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC4Q92889 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 AC098850.1-201ENST00000419919 790 ntBASIC16.85■□□□□ 0.29
ERCC4Q92889 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.85■□□□□ 0.29
ERCC4Q92889 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC4Q92889 UGT1A2P-201ENST00000454886 866 ntBASIC16.85■□□□□ 0.29
ERCC4Q92889 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.85■□□□□ 0.29
ERCC4Q92889 AP001582.1-201ENST00000525856 295 ntBASIC16.85■□□□□ 0.29
ERCC4Q92889 RFPL4AP1-201ENST00000530883 850 ntBASIC16.85■□□□□ 0.29
ERCC4Q92889 DUX4L47-201ENST00000566374 394 ntBASIC16.85■□□□□ 0.29
ERCC4Q92889 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ERCC4Q92889 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ERCC4Q92889 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.85■□□□□ 0.29
ERCC4Q92889 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC4Q92889 INTS4P2-202ENST00000614726 2019 ntBASIC16.84■□□□□ 0.29
ERCC4Q92889 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC4Q92889 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.84■□□□□ 0.29
ERCC4Q92889 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC4Q92889 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ERCC4Q92889 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.84■□□□□ 0.29
ERCC4Q92889 AL139094.1-201ENST00000405549 1188 ntBASIC16.84■□□□□ 0.29
ERCC4Q92889 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms