Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PPATP1-201ENST00000496669 1547 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 XBP1P1-201ENST00000436573 652 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC139887.2-204ENST00000503405 550 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PRSS3P1-201ENST00000503996 742 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 NT5C-204ENST00000578337 582 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AKR1B1P7-201ENST00000587229 952 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC008761.2-201ENST00000600512 419 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 LINC00528-201ENST00000600723 2160 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MPHOSPH6-201ENST00000258169 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 WASH6P-207ENST00000476066 720 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AP000763.1-201ENST00000539481 325 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TTN-AS1-231ENST00000589434 1066 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC244102.2-201ENST00000597568 955 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TTN-AS1-270ENST00000630096 915 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 HIST1H2APS4-202ENST00000635537 681 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 UBTFL1-201ENST00000530464 1182 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TNRC18P3-201ENST00000441896 2691 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 KRT8P18-201ENST00000413425 1445 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 VPREB3-202ENST00000398465 503 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AL353807.2-201ENST00000456382 220 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC108082.1-201ENST00000510857 331 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AP005264.5-201ENST00000590066 467 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC007032.1-201ENST00000609281 847 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 AC092171.3-201ENST00000610122 2651 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 PP12613-201ENST00000424958 2230 ntBASIC5.72□□□□□ -1.49
SYNE2Q8WXH0 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms