Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 DUXAP7-201ENST00000431038 689 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 BNIP3P42-201ENST00000454982 569 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC022616.2-201ENST00000523185 300 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC025580.1-201ENST00000559553 729 ntTSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC068987.2-201ENST00000565518 896 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 BNIP3P29-201ENST00000598302 571 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC011447.5-201ENST00000616168 564 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC073578.4-201ENST00000623945 514 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 COX11-210ENST00000639671 696 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC055811.4-201ENST00000624039 1754 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 AC026748.1-201ENST00000624349 3251 ntBASIC15.15■□□□□ 0.02
PTCD2Q8WV60 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTCD2Q8WV60 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 MTCYBP32-201ENST00000427945 1084 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AL355864.2-201ENST00000447420 863 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 Z97198.1-201ENST00000452366 658 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC007551.1-201ENST00000457394 519 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC026434.2-201ENST00000506094 1078 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 KRT18P25-201ENST00000508931 1278 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC104989.1-201ENST00000519711 778 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC092574.1-201ENST00000609771 420 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 AC008033.3-201ENST00000612531 1407 ntBASIC15.14■□□□□ 0.01
PTCD2Q8WV60 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTCD2Q8WV60 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 LRRC59-203ENST00000576448 1531 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 AL354702.1-201ENST00000442006 1960 ntBASIC15.13■□□□□ 0.01
PTCD2Q8WV60 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PTCD2Q8WV60 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms