Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC027612.1-201ENST00000445234 2395 ntBASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC009477.1-201ENST00000452936 217 ntBASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 GAPDHP40-201ENST00000505218 1006 ntBASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AP001160.2-201ENST00000596071 487 ntBASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 AC099521.3-201ENST00000624251 2938 ntBASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.12□□□□□ -0.31
DNAAF1Q8NEP3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TREML5P-201ENST00000421694 576 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TSSK5P-201ENST00000423978 907 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 AL391069.4-201ENST00000609583 481 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 AL158212.4-201ENST00000624062 1286 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 COL6A4P2-202ENST00000504443 2753 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 AC016397.2-201ENST00000624848 1985 ntBASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DNAAF1Q8NEP3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms