Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 HELLS-212ENST00000630929 400 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC003102.2-201ENST00000589195 1469 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC006504.5-208ENST00000588784 2401 ntBASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.23□□□□□ -0.45
CCDC168Q8NDH2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 CFL1P6-201ENST00000400899 494 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AC108734.2-201ENST00000420887 1069 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AGGF1P2-201ENST00000426656 2106 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AC098934.1-203ENST00000442868 1262 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 KNOP1P1-201ENST00000542108 989 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AC080013.5-201ENST00000607044 679 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AC069224.1-201ENST00000566372 1715 ntBASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCDC168Q8NDH2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC006529.1-201ENST00000459978 637 ntBASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 ALG1L3P-201ENST00000503331 765 ntBASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 KRT8P1-201ENST00000557533 1207 ntBASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 AP002353.1-201ENST00000528257 1599 ntBASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCDC168Q8NDH2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms