Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 AL157813.1-201ENST00000612996 587 ntBASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 AC068587.10-201ENST00000641210 219 ntBASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC60Q8IWA6 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 TSPY26P-202ENST00000565928 3884 ntBASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 AC105129.2-201ENST00000559536 390 ntBASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 AC091812.3-201ENST00000621362 345 ntBASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC60Q8IWA6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 ISCA2P1-201ENST00000425548 448 ntBASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 Z97180.1-201ENST00000445173 988 ntBASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 RHOQP1-201ENST00000555758 579 ntBASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC60Q8IWA6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC60Q8IWA6 AC018629.1-201ENST00000623381 1736 ntBASIC16.33■□□□□ 0.21
CCDC60Q8IWA6 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms