Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTTNQ86VV8 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC134312.5-201ENST00000568031 1313 ntBASIC13.18□□□□□ -0.3
RTTNQ86VV8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC026748.1-201ENST00000624349 3251 ntBASIC13.18□□□□□ -0.3
RTTNQ86VV8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC005912.2-201ENST00000619492 2400 ntBASIC13.18□□□□□ -0.3
RTTNQ86VV8 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 KLF2P2-201ENST00000416807 1039 ntBASIC13.18□□□□□ -0.3
RTTNQ86VV8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 RN7SL560P-201ENST00000577943 264 ntBASIC13.18□□□□□ -0.3
RTTNQ86VV8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.18□□□□□ -0.3
RTTNQ86VV8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTTNQ86VV8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AL391280.1-201ENST00000506969 1062 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 TDH-203ENST00000531764 1110 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC233724.13-201ENST00000598383 410 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 LINC01101-201ENST00000622953 1884 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 EIF3FP3-201ENST00000434851 1086 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC068587.3-201ENST00000526613 355 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTTNQ86VV8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.17□□□□□ -0.3
RTTNQ86VV8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.17□□□□□ -0.3
RTTNQ86VV8 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms