Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CACNA2D4Q7Z3S7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AC004790.1-201ENST00000612686 536 ntBASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 BX539320.1-201ENST00000623759 877 ntBASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AL354702.1-201ENST00000442006 1960 ntBASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.34■□□□□ 0.21
CACNA2D4Q7Z3S7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.33■□□□□ 0.21
CACNA2D4Q7Z3S7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.33■□□□□ 0.21
CACNA2D4Q7Z3S7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CACNA2D4Q7Z3S7 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CACNA2D4Q7Z3S7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CACNA2D4Q7Z3S7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CACNA2D4Q7Z3S7 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC133552.6-201ENST00000613406 534 ntBASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 COX11-210ENST00000639671 696 ntBASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AL033527.4-201ENST00000641026 673 ntBASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC152010.1-201ENST00000415779 2006 ntBASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CACNA2D4Q7Z3S7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CACNA2D4Q7Z3S7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CACNA2D4Q7Z3S7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.32■□□□□ 0.2
CACNA2D4Q7Z3S7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CACNA2D4Q7Z3S7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CACNA2D4Q7Z3S7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms