Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AL136172.1-201ENST00000598590 1394 ntBASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 BNIP3P42-201ENST00000454982 569 ntBASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 BNIP3P29-201ENST00000598302 571 ntBASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AC011447.5-201ENST00000616168 564 ntBASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AC005252.3-201ENST00000623855 2258 ntBASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RNA5SP412-201ENST00000516234 123 ntBASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ZACNP1-201ENST00000612259 710 ntBASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 AC002472.3-201ENST00000640124 621 ntBASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
LYSMD3Q7Z3D4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AC092135.3-201ENST00000624151 1846 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AC140479.7-201ENST00000636301 2332 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 AC117489.1-201ENST00000625169 3217 ntBASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD3Q7Z3D4 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms