Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 FNTAP2-201ENST00000430308 634 ntBASIC17.55■□□□□ 0.4
CTR9Q6PD62 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 AC104073.2-201ENST00000453737 312 ntBASIC17.55■□□□□ 0.4
CTR9Q6PD62 BX284668.4-201ENST00000453917 508 ntBASIC17.55■□□□□ 0.4
CTR9Q6PD62 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 AC244452.3-201ENST00000636814 210 ntBASIC17.55■□□□□ 0.4
CTR9Q6PD62 AC004923.1-202ENST00000642106 209 ntBASIC17.55■□□□□ 0.4
CTR9Q6PD62 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 GRK6P1-201ENST00000400595 1711 ntBASIC17.55■□□□□ 0.4
CTR9Q6PD62 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.55■□□□□ 0.4
CTR9Q6PD62 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTR9Q6PD62 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 AC016700.1-201ENST00000429424 312 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 RPL18P13-201ENST00000478088 569 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 MIR6720-201ENST00000611664 98 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 AL139099.5-201ENST00000635274 300 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 AC068587.8-201ENST00000641239 219 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 AC138028.6-201ENST00000616106 1482 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 TNRC18P2-201ENST00000417666 2714 ntBASIC17.54■□□□□ 0.4
CTR9Q6PD62 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTR9Q6PD62 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTR9Q6PD62 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 AL590440.2-201ENST00000641973 1595 ntBASIC17.53■□□□□ 0.4
CTR9Q6PD62 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 AL157407.1-201ENST00000435784 904 ntBASIC17.53■□□□□ 0.4
CTR9Q6PD62 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 FAM58BP-201ENST00000439056 645 ntBASIC17.53■□□□□ 0.4
CTR9Q6PD62 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 HIST2H2BC-201ENST00000498492 580 ntBASIC17.53■□□□□ 0.4
CTR9Q6PD62 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTR9Q6PD62 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.53■□□□□ 0.4
CTR9Q6PD62 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms