Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CASC4Q6P4E1 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 KLF2P2-201ENST00000416807 1039 ntBASIC15.18■□□□□ 0.02
CASC4Q6P4E1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AC026434.2-201ENST00000506094 1078 ntBASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AC092552.1-201ENST00000547243 906 ntBASIC15.18■□□□□ 0.02
CASC4Q6P4E1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AL132655.2-201ENST00000596276 594 ntBASIC15.18■□□□□ 0.02
CASC4Q6P4E1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AL928921.2-201ENST00000641325 2442 ntBASIC15.18■□□□□ 0.02
CASC4Q6P4E1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 AGGF1P1-201ENST00000509500 2073 ntBASIC15.18■□□□□ 0.02
CASC4Q6P4E1 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CASC4Q6P4E1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SALL4P5-201ENST00000419001 1760 ntBASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SPTLC1P1-201ENST00000447199 261 ntBASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SERBP1P5-201ENST00000510079 1181 ntBASIC15.17■□□□□ 0.02
CASC4Q6P4E1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 DUX4L47-201ENST00000566374 394 ntBASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CASC4Q6P4E1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms