Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 RNMTL1P1-201ENST00000454103 560 ntBASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 AC005740.2-201ENST00000511085 419 ntBASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 RN7SL163P-201ENST00000583100 276 ntBASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 AC004923.1-202ENST00000642106 209 ntBASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 AC023157.3-201ENST00000619086 2088 ntBASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
H3F3CQ6NXT2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 E2F3P2-201ENST00000447755 1422 ntBASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 AC005089.1-201ENST00000619486 2241 ntBASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.71□□□□□ -0.22
H3F3CQ6NXT2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC004899.1-201ENST00000424687 1714 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC097376.2-205ENST00000610159 5334 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC005077.2-201ENST00000449786 690 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 EIF4HP1-201ENST00000453115 687 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 HIST2H2BC-201ENST00000498492 580 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 ACTG1P17-201ENST00000558391 1119 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 NDUFV2P1-201ENST00000596415 907 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AP000346.4-201ENST00000614827 381 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 AC068587.8-201ENST00000641239 219 ntBASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H3F3CQ6NXT2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms