Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 AC023310.1-201ENST00000554836 735 ntBASIC15.59■□□□□ 0.09
RNF43Q68DV7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.59■□□□□ 0.09
RNF43Q68DV7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.59■□□□□ 0.09
RNF43Q68DV7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RNF43Q68DV7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RNF43Q68DV7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.58■□□□□ 0.09
RNF43Q68DV7 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.58■□□□□ 0.09
RNF43Q68DV7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 LRRC59-203ENST00000576448 1531 ntBASIC15.58■□□□□ 0.09
RNF43Q68DV7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.58■□□□□ 0.09
RNF43Q68DV7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.58■□□□□ 0.09
RNF43Q68DV7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RNF43Q68DV7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 AC079781.5-202ENST00000641784 3743 ntBASIC15.58■□□□□ 0.08
RNF43Q68DV7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 ECM1P1-201ENST00000604092 1279 ntBASIC15.58■□□□□ 0.08
RNF43Q68DV7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 AHCYP2-201ENST00000430630 1300 ntBASIC15.58■□□□□ 0.08
RNF43Q68DV7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 WASH3P-207ENST00000560956 1394 ntBASIC15.58■□□□□ 0.08
RNF43Q68DV7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.58■□□□□ 0.08
RNF43Q68DV7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RNF43Q68DV7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
RNF43Q68DV7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RNF43Q68DV7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms