Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AGAP7P-201ENST00000582299 2062 ntBASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AGAP14-201ENST00000624701 2060 ntBASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 KRT18P4-201ENST00000422599 1288 ntBASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AL451000.1-201ENST00000451300 1186 ntBASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 MIR6816-201ENST00000620368 66 ntBASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
VPS13DQ5THJ4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AJ011931.1-201ENST00000618749 2492 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 RN7SL288P-201ENST00000490496 291 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 RN7SL582P-201ENST00000491078 279 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 HNRNPA1P5-201ENST00000558213 966 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC005586.2-201ENST00000563946 837 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC011462.4-201ENST00000616866 449 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AL133467.4-201ENST00000602953 725 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 PAUPAR-201ENST00000630360 2965 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 FES-203ENST00000394302 2133 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC015909.5-201ENST00000624336 2266 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 KRT18P62-201ENST00000446618 1287 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 AL365181.1-201ENST00000564032 1828 ntBASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
VPS13DQ5THJ4 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC006987.1-201ENST00000413610 527 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC092612.1-201ENST00000514501 998 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 FAM86B3P-203ENST00000523992 854 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SIGLEC22P-201ENST00000599104 714 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms