Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CDR2Q01850 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.8■□□□□ 0.12
CDR2Q01850 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CDR2Q01850 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.8■□□□□ 0.12
CDR2Q01850 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.8■□□□□ 0.12
CDR2Q01850 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.8■□□□□ 0.12
CDR2Q01850 INE1-201ENST00000456273 945 ntBASIC15.8■□□□□ 0.12
CDR2Q01850 ALG3P1-201ENST00000508806 1114 ntBASIC15.8■□□□□ 0.12
CDR2Q01850 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.8■□□□□ 0.12
CDR2Q01850 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 AL596325.1-201ENST00000563991 1082 ntBASIC15.8■□□□□ 0.12
CDR2Q01850 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.8■□□□□ 0.12
CDR2Q01850 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDR2Q01850 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.8■□□□□ 0.12
CDR2Q01850 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDR2Q01850 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CDR2Q01850 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 RN7SKP175-201ENST00000408472 289 ntBASIC15.79■□□□□ 0.12
CDR2Q01850 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CDR2Q01850 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.79■□□□□ 0.12
CDR2Q01850 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.79■□□□□ 0.12
CDR2Q01850 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.79■□□□□ 0.12
CDR2Q01850 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.79■□□□□ 0.12
CDR2Q01850 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.79■□□□□ 0.12
CDR2Q01850 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.79■□□□□ 0.12
CDR2Q01850 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDR2Q01850 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.79■□□□□ 0.12
CDR2Q01850 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.79■□□□□ 0.12
CDR2Q01850 AC106820.3-201ENST00000561653 397 ntBASIC15.79■□□□□ 0.12
CDR2Q01850 AC103988.2-201ENST00000561804 725 ntBASIC15.79■□□□□ 0.12
CDR2Q01850 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.79■□□□□ 0.12
CDR2Q01850 AC008735.3-201ENST00000596646 500 ntBASIC15.79■□□□□ 0.12
CDR2Q01850 ECM1P1-201ENST00000604092 1279 ntBASIC15.79■□□□□ 0.12
CDR2Q01850 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDR2Q01850 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.79■□□□□ 0.12
CDR2Q01850 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDR2Q01850 AC009093.2-202ENST00000620513 2079 ntBASIC15.79■□□□□ 0.12
CDR2Q01850 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.79■□□□□ 0.12
CDR2Q01850 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CDR2Q01850 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.78■□□□□ 0.12
CDR2Q01850 AC139712.1-201ENST00000378256 1875 ntBASIC15.78■□□□□ 0.12
CDR2Q01850 AC215219.1-201ENST00000400706 1817 ntBASIC15.78■□□□□ 0.12
CDR2Q01850 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDR2Q01850 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDR2Q01850 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 RN7SL832P-201ENST00000607781 1756 ntBASIC15.78■□□□□ 0.12
CDR2Q01850 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CDR2Q01850 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CDR2Q01850 AL512384.1-201ENST00000406683 331 ntBASIC15.78■□□□□ 0.12
CDR2Q01850 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.78■□□□□ 0.12
CDR2Q01850 BCRP2-202ENST00000447763 634 ntBASIC15.78■□□□□ 0.12
CDR2Q01850 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.78■□□□□ 0.12
CDR2Q01850 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDR2Q01850 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.78■□□□□ 0.12
CDR2Q01850 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDR2Q01850 BCRP6-201ENST00000510112 632 ntBASIC15.78■□□□□ 0.12
CDR2Q01850 BCRP7-201ENST00000511549 544 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms