Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC140912.1-201ENST00000577171 1054 ntBASIC14.31□□□□□ -0.12
HMGCS1Q01581 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMGCS1Q01581 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
HMGCS1Q01581 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 MYADML-201ENST00000474610 2147 ntBASIC14.3□□□□□ -0.12
HMGCS1Q01581 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 AC131206.1-201ENST00000538078 1211 ntBASIC14.3□□□□□ -0.12
HMGCS1Q01581 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 LINC02084-201ENST00000606069 1096 ntBASIC14.3□□□□□ -0.12
HMGCS1Q01581 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.3□□□□□ -0.12
HMGCS1Q01581 AL033527.5-201ENST00000641382 801 ntBASIC14.3□□□□□ -0.12
HMGCS1Q01581 AL138725.1-201ENST00000407347 1314 ntBASIC14.3□□□□□ -0.12
HMGCS1Q01581 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGCS1Q01581 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGCS1Q01581 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 AC020910.5-201ENST00000623668 1865 ntBASIC14.29□□□□□ -0.12
HMGCS1Q01581 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGCS1Q01581 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGCS1Q01581 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms