Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 KRT8P35-201ENST00000483942 1338 ntBASIC13.25□□□□□ -0.29
ACTA1P68133 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ACTA1P68133 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.25□□□□□ -0.29
ACTA1P68133 AC107890.1-201ENST00000422478 521 ntBASIC13.25□□□□□ -0.29
ACTA1P68133 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.25□□□□□ -0.29
ACTA1P68133 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.25□□□□□ -0.29
ACTA1P68133 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
ACTA1P68133 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 AC130686.1-201ENST00000622936 2466 ntBASIC13.25□□□□□ -0.29
ACTA1P68133 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.25□□□□□ -0.29
ACTA1P68133 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 TCAF1P1-201ENST00000414990 2232 ntBASIC13.25□□□□□ -0.29
ACTA1P68133 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
ACTA1P68133 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.25□□□□□ -0.29
ACTA1P68133 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.25□□□□□ -0.29
ACTA1P68133 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.25□□□□□ -0.29
ACTA1P68133 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
ACTA1P68133 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
ACTA1P68133 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.24□□□□□ -0.29
ACTA1P68133 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.24□□□□□ -0.29
ACTA1P68133 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.24□□□□□ -0.29
ACTA1P68133 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.24□□□□□ -0.29
ACTA1P68133 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.24□□□□□ -0.29
ACTA1P68133 AC025678.2-201ENST00000562061 970 ntBASIC13.24□□□□□ -0.29
ACTA1P68133 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 AL158211.3-201ENST00000607385 239 ntBASIC13.24□□□□□ -0.29
ACTA1P68133 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.24□□□□□ -0.29
ACTA1P68133 Z92544.3-201ENST00000624747 417 ntBASIC13.24□□□□□ -0.29
ACTA1P68133 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
ACTA1P68133 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
ACTA1P68133 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
ACTA1P68133 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms