Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 BOLA2P3-201ENST00000404566 256 ntBASIC14.43□□□□□ -0.1
YBX1P67809 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 KRT223P-202ENST00000449164 1292 ntBASIC14.43□□□□□ -0.1
YBX1P67809 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.43□□□□□ -0.1
YBX1P67809 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.43□□□□□ -0.1
YBX1P67809 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 MIR4683-201ENST00000579659 81 ntBASIC14.43□□□□□ -0.1
YBX1P67809 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
YBX1P67809 MST1P2-201ENST00000457982 2291 ntBASIC14.43□□□□□ -0.1
YBX1P67809 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.43□□□□□ -0.1
YBX1P67809 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.43□□□□□ -0.1
YBX1P67809 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
YBX1P67809 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.42□□□□□ -0.1
YBX1P67809 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 SALL4P5-201ENST00000419001 1760 ntBASIC14.42□□□□□ -0.1
YBX1P67809 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
YBX1P67809 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
YBX1P67809 AL354989.2-201ENST00000435838 1540 ntBASIC14.42□□□□□ -0.1
YBX1P67809 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
YBX1P67809 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
YBX1P67809 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
YBX1P67809 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 FAM8A4P-201ENST00000435433 1213 ntBASIC14.42□□□□□ -0.1
YBX1P67809 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 AC073413.1-201ENST00000603927 732 ntBASIC14.42□□□□□ -0.1
YBX1P67809 AC138696.2-201ENST00000607376 223 ntBASIC14.42□□□□□ -0.1
YBX1P67809 AL008721.1-201ENST00000609964 604 ntBASIC14.42□□□□□ -0.1
YBX1P67809 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.42□□□□□ -0.1
YBX1P67809 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
YBX1P67809 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
YBX1P67809 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.42□□□□□ -0.1
YBX1P67809 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
YBX1P67809 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.41□□□□□ -0.1
YBX1P67809 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.41□□□□□ -0.1
YBX1P67809 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
YBX1P67809 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
YBX1P67809 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms