Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KRT8P29-201ENST00000420409 1371 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S1P61966 AC232323.1-201ENST00000540724 2099 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S1P61966 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S1P61966 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S1P61966 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S1P61966 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.86□□□□□ -0.03
AP1S1P61966 AC092658.1-201ENST00000505836 891 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.86□□□□□ -0.03
AP1S1P61966 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.86□□□□□ -0.03
AP1S1P61966 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
AP1S1P61966 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 AC009884.2-201ENST00000603110 324 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
AP1S1P61966 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 LINC02228-204ENST00000642115 2962 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.86□□□□□ -0.03
AP1S1P61966 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.86□□□□□ -0.03
AP1S1P61966 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 INTS4P1-203ENST00000641008 3683 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 AC140479.7-201ENST00000636301 2332 ntBASIC14.86□□□□□ -0.03
AP1S1P61966 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP1S1P61966 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
AP1S1P61966 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
AP1S1P61966 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 OR2I1P-210ENST00000642037 4691 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
AP1S1P61966 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S1P61966 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S1P61966 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S1P61966 AL157407.1-201ENST00000435784 904 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 AC021723.1-201ENST00000486306 515 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S1P61966 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.85□□□□□ -0.03
AP1S1P61966 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.85□□□□□ -0.03
AP1S1P61966 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
AP1S1P61966 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.85□□□□□ -0.03
AP1S1P61966 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.85□□□□□ -0.03
AP1S1P61966 AC005730.2-201ENST00000564549 1184 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.85□□□□□ -0.03
AP1S1P61966 AC007663.3-201ENST00000609632 465 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 MIR6074-201ENST00000612054 107 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 AC006504.5-208ENST00000588784 2401 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
AP1S1P61966 AC106881.1-201ENST00000605849 3329 ntBASIC14.85□□□□□ -0.03
AP1S1P61966 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.85□□□□□ -0.03
AP1S1P61966 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
AP1S1P61966 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP1S1P61966 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.85□□□□□ -0.03
AP1S1P61966 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms