Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CXCR4P61073 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.53□□□□□ -0.24
CXCR4P61073 RN7SL618P-201ENST00000477850 296 ntBASIC13.53□□□□□ -0.24
CXCR4P61073 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.53□□□□□ -0.24
CXCR4P61073 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.53□□□□□ -0.24
CXCR4P61073 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCR4P61073 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.53□□□□□ -0.24
CXCR4P61073 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCR4P61073 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CXCR4P61073 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCR4P61073 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCR4P61073 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CXCR4P61073 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.53□□□□□ -0.24
CXCR4P61073 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CXCR4P61073 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.52□□□□□ -0.24
CXCR4P61073 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.52□□□□□ -0.24
CXCR4P61073 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.52□□□□□ -0.24
CXCR4P61073 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.52□□□□□ -0.24
CXCR4P61073 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.52□□□□□ -0.24
CXCR4P61073 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
CXCR4P61073 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.52□□□□□ -0.24
CXCR4P61073 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 AC019294.4-201ENST00000561777 2905 ntBASIC13.52□□□□□ -0.24
CXCR4P61073 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CXCR4P61073 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 AL645937.2-201ENST00000396808 931 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.52□□□□□ -0.25
CXCR4P61073 HLA-V-204ENST00000476601 1289 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 AC112482.1-201ENST00000492080 688 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 AL512356.2-201ENST00000546955 174 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.52□□□□□ -0.25
CXCR4P61073 AC051619.7-201ENST00000568314 623 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 TEX28P1-201ENST00000613479 1221 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.52□□□□□ -0.25
CXCR4P61073 TEX28P2-201ENST00000617764 1221 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 AL109936.8-201ENST00000641772 604 ntBASIC13.52□□□□□ -0.25
CXCR4P61073 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CXCR4P61073 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.52□□□□□ -0.25
CXCR4P61073 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.52□□□□□ -0.25
CXCR4P61073 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.52□□□□□ -0.25
CXCR4P61073 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CXCR4P61073 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.52□□□□□ -0.25
CXCR4P61073 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CXCR4P61073 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.52□□□□□ -0.25
CXCR4P61073 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.52□□□□□ -0.25
CXCR4P61073 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CXCR4P61073 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 AP002761.4-201ENST00000565433 3361 ntBASIC13.51□□□□□ -0.25
CXCR4P61073 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CXCR4P61073 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms