Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.28□□□□□ -0.28
CLRN1P58418 AL354718.3-201ENST00000616414 581 ntBASIC13.28□□□□□ -0.28
CLRN1P58418 CR382287.1-201ENST00000623954 586 ntBASIC13.28□□□□□ -0.28
CLRN1P58418 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.28□□□□□ -0.28
CLRN1P58418 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
CLRN1P58418 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CLRN1P58418 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CLRN1P58418 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLRN1P58418 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLRN1P58418 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLRN1P58418 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.27□□□□□ -0.28
CLRN1P58418 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.27□□□□□ -0.28
CLRN1P58418 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CLRN1P58418 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CLRN1P58418 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLRN1P58418 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.27□□□□□ -0.28
CLRN1P58418 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.27□□□□□ -0.28
CLRN1P58418 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.27□□□□□ -0.28
CLRN1P58418 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CLRN1P58418 AC097359.2-201ENST00000604992 2389 ntBASIC13.27□□□□□ -0.29
CLRN1P58418 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 AL512384.1-201ENST00000406683 331 ntBASIC13.27□□□□□ -0.29
CLRN1P58418 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.27□□□□□ -0.29
CLRN1P58418 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.27□□□□□ -0.29
CLRN1P58418 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.27□□□□□ -0.29
CLRN1P58418 AP001889.1-201ENST00000525414 633 ntBASIC13.27□□□□□ -0.29
CLRN1P58418 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
CLRN1P58418 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 RPSAP52-203ENST00000622976 1023 ntBASIC13.27□□□□□ -0.29
CLRN1P58418 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CLRN1P58418 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 AP001267.2-201ENST00000532619 2086 ntBASIC13.27□□□□□ -0.29
CLRN1P58418 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CLRN1P58418 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CLRN1P58418 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CLRN1P58418 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CLRN1P58418 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CLRN1P58418 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms