Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.52■□□□□ 0.56
KCNQ4P56696 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.52■□□□□ 0.56
KCNQ4P56696 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNQ4P56696 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KCNQ4P56696 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
KCNQ4P56696 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNQ4P56696 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.52■□□□□ 0.55
KCNQ4P56696 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNQ4P56696 AC067931.2-201ENST00000623655 2003 ntBASIC18.52■□□□□ 0.55
KCNQ4P56696 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNQ4P56696 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
KCNQ4P56696 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNQ4P56696 AC139712.1-201ENST00000378256 1875 ntBASIC18.52■□□□□ 0.55
KCNQ4P56696 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KCNQ4P56696 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
KCNQ4P56696 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KCNQ4P56696 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
KCNQ4P56696 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
KCNQ4P56696 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
KCNQ4P56696 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
KCNQ4P56696 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.51■□□□□ 0.55
KCNQ4P56696 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 RN7SL564P-201ENST00000496309 250 ntBASIC18.51■□□□□ 0.55
KCNQ4P56696 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KCNQ4P56696 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC18.51■□□□□ 0.55
KCNQ4P56696 RN7SL665P-201ENST00000578793 300 ntBASIC18.51■□□□□ 0.55
KCNQ4P56696 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNQ4P56696 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
KCNQ4P56696 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNQ4P56696 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.51■□□□□ 0.55
KCNQ4P56696 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 AC004554.1-201ENST00000422830 1468 ntBASIC18.51■□□□□ 0.55
KCNQ4P56696 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.51■□□□□ 0.55
KCNQ4P56696 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KCNQ4P56696 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 AC020658.6-201ENST00000623564 1870 ntBASIC18.5■□□□□ 0.55
KCNQ4P56696 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNQ4P56696 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 PTGER4P2-201ENST00000328411 252 ntBASIC18.5■□□□□ 0.55
KCNQ4P56696 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNQ4P56696 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNQ4P56696 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNQ4P56696 PTGER4P3-201ENST00000458150 252 ntBASIC18.5■□□□□ 0.55
KCNQ4P56696 SCARNA12-201ENST00000459155 270 ntBASIC18.5■□□□□ 0.55
KCNQ4P56696 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KCNQ4P56696 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC18.5■□□□□ 0.55
KCNQ4P56696 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.5■□□□□ 0.55
KCNQ4P56696 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.5■□□□□ 0.55
KCNQ4P56696 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC18.5■□□□□ 0.55
KCNQ4P56696 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNQ4P56696 AC092135.3-201ENST00000624151 1846 ntBASIC18.5■□□□□ 0.55
KCNQ4P56696 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KCNQ4P56696 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.5■□□□□ 0.55
KCNQ4P56696 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms