Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.26■□□□□ 0.19
PMS1P54277 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 AC089987.1-201ENST00000551654 2209 ntBASIC16.26■□□□□ 0.19
PMS1P54277 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PMS1P54277 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.26■□□□□ 0.19
PMS1P54277 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 BCRP2-202ENST00000447763 634 ntBASIC16.26■□□□□ 0.19
PMS1P54277 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.26■□□□□ 0.19
PMS1P54277 INE1-201ENST00000456273 945 ntBASIC16.26■□□□□ 0.19
PMS1P54277 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.26■□□□□ 0.19
PMS1P54277 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.26■□□□□ 0.19
PMS1P54277 BCRP6-201ENST00000510112 632 ntBASIC16.26■□□□□ 0.19
PMS1P54277 BCRP7-201ENST00000511549 544 ntBASIC16.26■□□□□ 0.19
PMS1P54277 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.26■□□□□ 0.19
PMS1P54277 AP005018.1-201ENST00000525475 301 ntBASIC16.26■□□□□ 0.19
PMS1P54277 SLC25A47P1-201ENST00000531577 414 ntBASIC16.26■□□□□ 0.19
PMS1P54277 AC132938.2-201ENST00000579188 680 ntBASIC16.26■□□□□ 0.19
PMS1P54277 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.26■□□□□ 0.19
PMS1P54277 AC008735.3-201ENST00000596646 500 ntBASIC16.26■□□□□ 0.19
PMS1P54277 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 AL591163.1-201ENST00000641757 987 ntBASIC16.26■□□□□ 0.19
PMS1P54277 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PMS1P54277 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PMS1P54277 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 CNTNAP3P2-201ENST00000617175 3861 ntBASIC16.26■□□□□ 0.19
PMS1P54277 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PMS1P54277 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.26■□□□□ 0.19
PMS1P54277 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.25■□□□□ 0.19
PMS1P54277 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 BEND3P1-201ENST00000421591 1944 ntBASIC16.25■□□□□ 0.19
PMS1P54277 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.25■□□□□ 0.19
PMS1P54277 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.25■□□□□ 0.19
PMS1P54277 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.25■□□□□ 0.19
PMS1P54277 ALG3P1-201ENST00000508806 1114 ntBASIC16.25■□□□□ 0.19
PMS1P54277 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.25■□□□□ 0.19
PMS1P54277 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PMS1P54277 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 AC244669.2-201ENST00000612320 853 ntBASIC16.25■□□□□ 0.19
PMS1P54277 AC132938.4-201ENST00000623835 848 ntBASIC16.25■□□□□ 0.19
PMS1P54277 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PMS1P54277 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PMS1P54277 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PMS1P54277 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PMS1P54277 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms