Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HMGA2P52926 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 AC107918.4-201ENST00000641966 3141 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
HMGA2P52926 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 AC064801.2-201ENST00000625052 1303 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 MRPS18AP1-201ENST00000414458 589 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 SOCS2P1-201ENST00000417727 557 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.49□□□□□ -0.25
HMGA2P52926 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 MYCLP2-201ENST00000449268 967 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.49□□□□□ -0.25
HMGA2P52926 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.49□□□□□ -0.25
HMGA2P52926 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.49□□□□□ -0.25
HMGA2P52926 AL359711.2-201ENST00000563105 872 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.49□□□□□ -0.25
HMGA2P52926 AC093028.1-201ENST00000622998 982 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
HMGA2P52926 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.49□□□□□ -0.25
HMGA2P52926 AC068760.1-201ENST00000493579 1953 ntBASIC13.49□□□□□ -0.25
HMGA2P52926 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
HMGA2P52926 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
HMGA2P52926 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
HMGA2P52926 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
HMGA2P52926 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.48□□□□□ -0.25
HMGA2P52926 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.48□□□□□ -0.25
HMGA2P52926 AC092552.1-201ENST00000547243 906 ntBASIC13.48□□□□□ -0.25
HMGA2P52926 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.48□□□□□ -0.25
HMGA2P52926 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.48□□□□□ -0.25
HMGA2P52926 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.48□□□□□ -0.25
HMGA2P52926 AC008761.3-201ENST00000624803 892 ntBASIC13.48□□□□□ -0.25
HMGA2P52926 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.48□□□□□ -0.25
HMGA2P52926 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.48□□□□□ -0.25
HMGA2P52926 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
HMGA2P52926 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
HMGA2P52926 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms