Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
PTPN6P29350 TMEM14DP-201ENST00000422205 345 ntBASIC14.07□□□□□ -0.16
PTPN6P29350 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 TMEM198B-204ENST00000484016 896 ntBASIC14.07□□□□□ -0.16
PTPN6P29350 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 AC131206.1-201ENST00000538078 1211 ntBASIC14.07□□□□□ -0.16
PTPN6P29350 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.07□□□□□ -0.16
PTPN6P29350 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.07□□□□□ -0.16
PTPN6P29350 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 AC015936.2-201ENST00000593177 259 ntBASIC14.07□□□□□ -0.16
PTPN6P29350 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.07□□□□□ -0.16
PTPN6P29350 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.07□□□□□ -0.16
PTPN6P29350 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
PTPN6P29350 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PTPN6P29350 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
PTPN6P29350 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 AC215219.1-201ENST00000400706 1817 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.06□□□□□ -0.16
PTPN6P29350 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PTPN6P29350 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PTPN6P29350 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.06□□□□□ -0.16
PTPN6P29350 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
PTPN6P29350 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.06□□□□□ -0.16
PTPN6P29350 ACTG1P3-201ENST00000431775 1114 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.06□□□□□ -0.16
PTPN6P29350 U91328.1-201ENST00000437528 223 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.06□□□□□ -0.16
PTPN6P29350 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.06□□□□□ -0.16
PTPN6P29350 AP001582.1-201ENST00000525856 295 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 MIR5189-201ENST00000577370 114 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 CLUHP6-201ENST00000580789 941 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.06□□□□□ -0.16
PTPN6P29350 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.06□□□□□ -0.16
PTPN6P29350 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.06□□□□□ -0.16
PTPN6P29350 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 AL138725.1-201ENST00000407347 1314 ntBASIC14.06□□□□□ -0.16
PTPN6P29350 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
PTPN6P29350 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.06□□□□□ -0.16
PTPN6P29350 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms