Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.76■□□□□ 0.43
KCNA3P22001 AL590235.1-201ENST00000564650 861 ntBASIC17.76■□□□□ 0.43
KCNA3P22001 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 AC233280.19-201ENST00000633223 136 ntBASIC17.76■□□□□ 0.43
KCNA3P22001 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KCNA3P22001 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KCNA3P22001 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KCNA3P22001 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.76■□□□□ 0.43
KCNA3P22001 LINC00528-201ENST00000600723 2160 ntBASIC17.76■□□□□ 0.43
KCNA3P22001 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.75■□□□□ 0.43
KCNA3P22001 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 AC092135.3-201ENST00000624151 1846 ntBASIC17.75■□□□□ 0.43
KCNA3P22001 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 AC106827.1-201ENST00000366454 431 ntBASIC17.75■□□□□ 0.43
KCNA3P22001 PPP1R2P4-201ENST00000424051 595 ntBASIC17.75■□□□□ 0.43
KCNA3P22001 RPL3P5-201ENST00000441645 1232 ntBASIC17.75■□□□□ 0.43
KCNA3P22001 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.75■□□□□ 0.43
KCNA3P22001 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.75■□□□□ 0.43
KCNA3P22001 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.75■□□□□ 0.43
KCNA3P22001 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.75■□□□□ 0.43
KCNA3P22001 GAS7-216ENST00000583882 553 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC17.75■□□□□ 0.43
KCNA3P22001 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.75■□□□□ 0.43
KCNA3P22001 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 CROCCP1-201ENST00000426910 5675 ntBASIC17.75■□□□□ 0.43
KCNA3P22001 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.75■□□□□ 0.43
KCNA3P22001 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
KCNA3P22001 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KCNA3P22001 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KCNA3P22001 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 KHSRPP1-201ENST00000427983 1768 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.74■□□□□ 0.43
KCNA3P22001 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.74■□□□□ 0.43
KCNA3P22001 AC092570.1-201ENST00000414446 469 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
KCNA3P22001 RN7SL767P-201ENST00000493013 295 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.74■□□□□ 0.43
KCNA3P22001 BCRP4-201ENST00000506079 804 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.74■□□□□ 0.43
KCNA3P22001 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
KCNA3P22001 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC17.74■□□□□ 0.43
KCNA3P22001 SNORD3B-1-201ENST00000577988 758 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 AL160191.2-201ENST00000603975 601 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 AL021707.6-201ENST00000609212 491 ntBASIC17.74■□□□□ 0.43
KCNA3P22001 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC17.74■□□□□ 0.43
KCNA3P22001 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
KCNA3P22001 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
KCNA3P22001 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KCNA3P22001 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KCNA3P22001 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.73■□□□□ 0.43
KCNA3P22001 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.73■□□□□ 0.43
KCNA3P22001 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms