Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCAP17252 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCAP17252 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PRKCAP17252 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.82□□□□□ -0.2
PRKCAP17252 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PRKCAP17252 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.82□□□□□ -0.2
PRKCAP17252 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.82□□□□□ -0.2
PRKCAP17252 ACTG1P3-201ENST00000431775 1114 ntBASIC13.82□□□□□ -0.2
PRKCAP17252 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.82□□□□□ -0.2
PRKCAP17252 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.82□□□□□ -0.2
PRKCAP17252 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 RN7SL837P-201ENST00000463010 287 ntBASIC13.82□□□□□ -0.2
PRKCAP17252 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.82□□□□□ -0.2
PRKCAP17252 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 RPSAP52-203ENST00000622976 1023 ntBASIC13.82□□□□□ -0.2
PRKCAP17252 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
PRKCAP17252 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRKCAP17252 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
PRKCAP17252 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.82□□□□□ -0.2
PRKCAP17252 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCAP17252 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCAP17252 CU639417.3-201ENST00000624240 1404 ntBASIC13.81□□□□□ -0.2
PRKCAP17252 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCAP17252 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCAP17252 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.81□□□□□ -0.2
PRKCAP17252 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PRKCAP17252 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PRKCAP17252 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PRKCAP17252 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
PRKCAP17252 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PRKCAP17252 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.81□□□□□ -0.2
PRKCAP17252 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.81□□□□□ -0.2
PRKCAP17252 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRKCAP17252 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.81□□□□□ -0.2
PRKCAP17252 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms