Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL3L1P16619 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCL3L1P16619 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL3L1P16619 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CCL3L1P16619 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCL3L1P16619 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CCL3L1P16619 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL3L1P16619 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL3L1P16619 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.24□□□□□ -0.45
CCL3L1P16619 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL3L1P16619 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 CNN2P10-201ENST00000443067 918 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 BNIP3P42-201ENST00000454982 569 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL3L1P16619 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 AP001267.2-201ENST00000532619 2086 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL3L1P16619 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.24□□□□□ -0.45
CCL3L1P16619 ST20-AS1-201ENST00000560255 4223 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 C2orf69P2-201ENST00000562032 1123 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CCL3L1P16619 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL3L1P16619 MRPL37P1-201ENST00000592451 1337 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 BNIP3P29-201ENST00000598302 571 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 AC011447.5-201ENST00000616168 564 ntBASIC12.24□□□□□ -0.45
CCL3L1P16619 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCL3L1P16619 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCL3L1P16619 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL3L1P16619 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL3L1P16619 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL3L1P16619 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCL3L1P16619 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms