Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.41■□□□□ 0.38
TOP1P11387 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TOP1P11387 AL008638.5-201ENST00000623814 1298 ntBASIC17.41■□□□□ 0.38
TOP1P11387 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TOP1P11387 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 SHC1P1-201ENST00000425230 1745 ntBASIC17.41■□□□□ 0.38
TOP1P11387 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.41■□□□□ 0.38
TOP1P11387 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TOP1P11387 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP1P11387 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TOP1P11387 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP1P11387 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
TOP1P11387 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.4■□□□□ 0.38
TOP1P11387 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.4■□□□□ 0.38
TOP1P11387 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TOP1P11387 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.4■□□□□ 0.38
TOP1P11387 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.4■□□□□ 0.38
TOP1P11387 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.4■□□□□ 0.38
TOP1P11387 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 AC008825.2-201ENST00000603374 718 ntBASIC17.4■□□□□ 0.38
TOP1P11387 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TOP1P11387 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TOP1P11387 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.4■□□□□ 0.38
TOP1P11387 AJ011931.1-201ENST00000618749 2492 ntBASIC17.4■□□□□ 0.38
TOP1P11387 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP1P11387 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TOP1P11387 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TOP1P11387 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
TOP1P11387 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.39■□□□□ 0.37
TOP1P11387 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.39■□□□□ 0.37
TOP1P11387 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.39■□□□□ 0.37
TOP1P11387 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.39■□□□□ 0.37
TOP1P11387 AC006033.1-201ENST00000440505 426 ntBASIC17.39■□□□□ 0.37
TOP1P11387 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.39■□□□□ 0.37
TOP1P11387 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.39■□□□□ 0.37
TOP1P11387 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.39■□□□□ 0.37
TOP1P11387 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.39■□□□□ 0.37
TOP1P11387 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.39■□□□□ 0.37
TOP1P11387 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 AL022328.3-201ENST00000607943 679 ntBASIC17.39■□□□□ 0.37
TOP1P11387 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
TOP1P11387 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms