Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.53■□□□□ 0.24
HOXC6P09630 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HOXC6P09630 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.52■□□□□ 0.24
HOXC6P09630 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
HOXC6P09630 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.52■□□□□ 0.24
HOXC6P09630 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.52■□□□□ 0.24
HOXC6P09630 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HOXC6P09630 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.52■□□□□ 0.24
HOXC6P09630 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HOXC6P09630 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.52■□□□□ 0.24
HOXC6P09630 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC6P09630 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 ALG1L6P-201ENST00000515248 758 ntBASIC16.52■□□□□ 0.24
HOXC6P09630 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC6P09630 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC6P09630 AC141586.1-203ENST00000567242 366 ntBASIC16.52■□□□□ 0.24
HOXC6P09630 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC6P09630 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.52■□□□□ 0.24
HOXC6P09630 RN7SL470P-201ENST00000583069 259 ntBASIC16.52■□□□□ 0.24
HOXC6P09630 AC005357.2-202ENST00000590507 1060 ntBASIC16.52■□□□□ 0.24
HOXC6P09630 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.52■□□□□ 0.24
HOXC6P09630 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HOXC6P09630 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HOXC6P09630 AC104640.1-201ENST00000562617 2109 ntBASIC16.52■□□□□ 0.23
HOXC6P09630 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.52■□□□□ 0.23
HOXC6P09630 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
HOXC6P09630 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HOXC6P09630 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HOXC6P09630 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HOXC6P09630 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.52■□□□□ 0.23
HOXC6P09630 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.23
HOXC6P09630 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.52■□□□□ 0.23
HOXC6P09630 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HOXC6P09630 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.52■□□□□ 0.23
HOXC6P09630 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 BAK1P1-201ENST00000317045 636 ntBASIC16.51■□□□□ 0.23
HOXC6P09630 KRT17P5-201ENST00000332088 839 ntBASIC16.51■□□□□ 0.23
HOXC6P09630 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 KRT8P1-201ENST00000557533 1207 ntBASIC16.51■□□□□ 0.23
HOXC6P09630 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 AC124068.2-201ENST00000569473 1109 ntBASIC16.51■□□□□ 0.23
HOXC6P09630 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.51■□□□□ 0.23
HOXC6P09630 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms