Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC015818.8-201ENST00000587907 1519 ntBASIC16.24■□□□□ 0.19
CLTAP09496 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLTAP09496 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLTAP09496 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLTAP09496 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 MIR1908-201ENST00000410394 80 ntBASIC16.24■□□□□ 0.19
CLTAP09496 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.24■□□□□ 0.19
CLTAP09496 ACTBP11-201ENST00000436287 1126 ntBASIC16.24■□□□□ 0.19
CLTAP09496 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.24■□□□□ 0.19
CLTAP09496 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLTAP09496 FAM86HP-204ENST00000513466 959 ntBASIC16.24■□□□□ 0.19
CLTAP09496 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.24■□□□□ 0.19
CLTAP09496 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CLTAP09496 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.24■□□□□ 0.19
CLTAP09496 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.24■□□□□ 0.19
CLTAP09496 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLTAP09496 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.24■□□□□ 0.19
CLTAP09496 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
CLTAP09496 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 BRWD1P1-201ENST00000401091 371 ntBASIC16.23■□□□□ 0.19
CLTAP09496 AC079178.1-201ENST00000420915 656 ntBASIC16.23■□□□□ 0.19
CLTAP09496 GOLGA2P4-201ENST00000441462 777 ntBASIC16.23■□□□□ 0.19
CLTAP09496 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.23■□□□□ 0.19
CLTAP09496 MIR4683-201ENST00000579659 81 ntBASIC16.23■□□□□ 0.19
CLTAP09496 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.23■□□□□ 0.19
CLTAP09496 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.23■□□□□ 0.19
CLTAP09496 AC244157.2-201ENST00000616239 1006 ntBASIC16.23■□□□□ 0.19
CLTAP09496 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CLTAP09496 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.23■□□□□ 0.19
CLTAP09496 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLTAP09496 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLTAP09496 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLTAP09496 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLTAP09496 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.22■□□□□ 0.19
CLTAP09496 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.22■□□□□ 0.19
CLTAP09496 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLTAP09496 AC009093.2-202ENST00000620513 2079 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms