Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.99□□□□□ -0.01
HLA-DQB2P05538 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AL023775.1-201ENST00000454907 1746 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 OR8S1-201ENST00000310194 1080 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 MIR326-201ENST00000362220 95 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AC010141.1-201ENST00000411585 623 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 MIR4741-201ENST00000579822 90 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 MIR6805-201ENST00000615055 62 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 AC012617.1-204ENST00000586340 2305 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
HLA-DQB2P05538 LINC01230-201ENST00000625222 3017 ntBASIC14.98□□□□□ -0.01
HLA-DQB2P05538 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 SHC1P1-201ENST00000425230 1745 ntBASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 OR2I1P-210ENST00000642037 4691 ntBASIC14.97□□□□□ -0.01
HLA-DQB2P05538 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 RN7SL832P-201ENST00000607781 1756 ntBASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms