Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.61□□□□□ -0.39
CD3DP04234 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.61□□□□□ -0.39
CD3DP04234 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD3DP04234 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CD3DP04234 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.61□□□□□ -0.39
CD3DP04234 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CD3DP04234 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CD3DP04234 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.6□□□□□ -0.39
CD3DP04234 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 AC023274.1-201ENST00000418278 595 ntBASIC12.6□□□□□ -0.39
CD3DP04234 MED15P5-201ENST00000423150 992 ntBASIC12.6□□□□□ -0.39
CD3DP04234 KRT18P32-201ENST00000424695 1287 ntBASIC12.6□□□□□ -0.39
CD3DP04234 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.6□□□□□ -0.39
CD3DP04234 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.6□□□□□ -0.39
CD3DP04234 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC12.6□□□□□ -0.39
CD3DP04234 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.6□□□□□ -0.39
CD3DP04234 AC140113.2-201ENST00000604370 208 ntBASIC12.6□□□□□ -0.39
CD3DP04234 AL589739.1-201ENST00000607720 493 ntBASIC12.6□□□□□ -0.39
CD3DP04234 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.6□□□□□ -0.39
CD3DP04234 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.6□□□□□ -0.39
CD3DP04234 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.6□□□□□ -0.39
CD3DP04234 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CD3DP04234 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.59□□□□□ -0.39
CD3DP04234 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.59□□□□□ -0.39
CD3DP04234 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CD3DP04234 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
CD3DP04234 AL158070.2-201ENST00000623713 1621 ntBASIC12.59□□□□□ -0.39
CD3DP04234 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CD3DP04234 ZNF259P1-201ENST00000407656 1365 ntBASIC12.59□□□□□ -0.39
CD3DP04234 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CD3DP04234 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CD3DP04234 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.59□□□□□ -0.39
CD3DP04234 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CD3DP04234 MIR1224-201ENST00000408193 85 ntBASIC12.59□□□□□ -0.39
CD3DP04234 AL080243.2-201ENST00000418783 582 ntBASIC12.59□□□□□ -0.39
CD3DP04234 FAM58DP-201ENST00000428076 619 ntBASIC12.59□□□□□ -0.39
CD3DP04234 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.59□□□□□ -0.39
CD3DP04234 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CD3DP04234 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CD3DP04234 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.59□□□□□ -0.39
CD3DP04234 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms