Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.58■□□□□ 0.4
MBD4O95243 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MBD4O95243 AC006122.1-201ENST00000493323 440 ntBASIC17.58■□□□□ 0.4
MBD4O95243 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.58■□□□□ 0.4
MBD4O95243 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.58■□□□□ 0.4
MBD4O95243 AC022217.1-201ENST00000521069 738 ntBASIC17.58■□□□□ 0.4
MBD4O95243 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.58■□□□□ 0.4
MBD4O95243 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.58■□□□□ 0.4
MBD4O95243 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.58■□□□□ 0.4
MBD4O95243 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
MBD4O95243 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.58■□□□□ 0.4
MBD4O95243 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.58■□□□□ 0.4
MBD4O95243 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
MBD4O95243 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.58■□□□□ 0.4
MBD4O95243 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 PCDHA3-202ENST00000532566 4594 ntBASIC17.58■□□□□ 0.4
MBD4O95243 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
MBD4O95243 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MBD4O95243 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
MBD4O95243 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.58■□□□□ 0.4
MBD4O95243 CYP4F23P-201ENST00000593402 1579 ntBASIC17.57■□□□□ 0.4
MBD4O95243 AL133338.1-201ENST00000565695 1517 ntBASIC17.57■□□□□ 0.4
MBD4O95243 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.57■□□□□ 0.4
MBD4O95243 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
MBD4O95243 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
MBD4O95243 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 CALR4P-201ENST00000431943 946 ntBASIC17.57■□□□□ 0.4
MBD4O95243 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.57■□□□□ 0.4
MBD4O95243 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 SNORD3B-2-202ENST00000571722 791 ntBASIC17.57■□□□□ 0.4
MBD4O95243 AL645939.5-201ENST00000606834 243 ntBASIC17.57■□□□□ 0.4
MBD4O95243 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 AL139099.5-201ENST00000635274 300 ntBASIC17.57■□□□□ 0.4
MBD4O95243 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 AC144522.1-201ENST00000625111 1658 ntBASIC17.57■□□□□ 0.4
MBD4O95243 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
MBD4O95243 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MBD4O95243 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.57■□□□□ 0.4
MBD4O95243 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
MBD4O95243 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
MBD4O95243 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD4O95243 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MBD4O95243 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.56■□□□□ 0.4
MBD4O95243 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
MBD4O95243 DEF8-202ENST00000418391 852 ntTSL 2 BASIC17.56■□□□□ 0.4
MBD4O95243 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.56■□□□□ 0.4
MBD4O95243 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.56■□□□□ 0.4
MBD4O95243 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms