Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 FTH1P18-201ENST00000412071 549 ntBASIC6.38□□□□□ -1.39
USH2AO75445 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 DNM1P46-202ENST00000415963 882 ntBASIC6.38□□□□□ -1.39
USH2AO75445 AC093106.1-201ENST00000437271 352 ntBASIC6.38□□□□□ -1.39
USH2AO75445 AC005011.1-201ENST00000455206 210 ntBASIC6.38□□□□□ -1.39
USH2AO75445 AC099343.1-201ENST00000513481 609 ntBASIC6.38□□□□□ -1.39
USH2AO75445 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC6.38□□□□□ -1.39
USH2AO75445 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 FAM223B-202ENST00000598177 713 ntBASIC6.38□□□□□ -1.39
USH2AO75445 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
USH2AO75445 FAM223A-202ENST00000625204 713 ntBASIC6.38□□□□□ -1.39
USH2AO75445 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 AC069224.1-201ENST00000566372 1715 ntBASIC6.38□□□□□ -1.39
USH2AO75445 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC6.38□□□□□ -1.39
USH2AO75445 RN7SL838P-201ENST00000481676 295 ntBASIC6.38□□□□□ -1.39
USH2AO75445 MARK2P17-201ENST00000498560 841 ntBASIC6.38□□□□□ -1.39
USH2AO75445 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 GCOM2-201ENST00000509133 1104 ntBASIC6.38□□□□□ -1.39
USH2AO75445 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC6.38□□□□□ -1.39
USH2AO75445 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC6.38□□□□□ -1.39
USH2AO75445 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 NEMF-210ENST00000556672 590 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 RN7SL524P-201ENST00000581152 300 ntBASIC6.38□□□□□ -1.39
USH2AO75445 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 MIR6819-201ENST00000622122 61 ntBASIC6.38□□□□□ -1.39
USH2AO75445 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USH2AO75445 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USH2AO75445 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC6.38□□□□□ -1.39
USH2AO75445 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 TP73-207ENST00000378290 1831 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USH2AO75445 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC6.37□□□□□ -1.39
USH2AO75445 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
USH2AO75445 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms