Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PDE6DO43924 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
PDE6DO43924 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.56
PDE6DO43924 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
PDE6DO43924 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.52□□□□□ -0.56
PDE6DO43924 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.56
PDE6DO43924 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PDE6DO43924 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
PDE6DO43924 AC024075.2-201ENST00000598112 1473 ntBASIC11.52□□□□□ -0.56
PDE6DO43924 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.52□□□□□ -0.57
PDE6DO43924 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.52□□□□□ -0.57
PDE6DO43924 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.52□□□□□ -0.57
PDE6DO43924 AC106730.1-201ENST00000566722 1090 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 AC099522.2-201ENST00000607001 744 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
PDE6DO43924 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 AGAP10P-201ENST00000454844 2418 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 NCLP1-201ENST00000445357 1963 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 DLX4-206ENST00000611342 1662 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.52□□□□□ -0.57
PDE6DO43924 REXO1L1P-201ENST00000379010 6598 ntBASIC11.52□□□□□ -0.57
PDE6DO43924 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.52□□□□□ -0.57
PDE6DO43924 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.52□□□□□ -0.57
PDE6DO43924 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
PDE6DO43924 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PDE6DO43924 HSPA8P5-201ENST00000456928 2069 ntBASIC11.51□□□□□ -0.57
PDE6DO43924 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.51□□□□□ -0.57
PDE6DO43924 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PDE6DO43924 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms